[share_ebook] Mastering Perl for Bioinformatics


Author: James D. Tisdall

Date: 0000-00-00

ISBN: 9780596003074

Pages: 377

Language: English

Format: pdf

Category: Technical


Posted on 2011-12-28, by ecabuk.

Description



Historically, programming hasn\'t been regarded as a crucial talent for biologists. But now, with accessibility to vast amounts of biological information contained in public databases, programming abilities are progressively in robust desire in biology research and advancement. Perl, with its highly created capacities in string dealing with, text processing, networking, and speedy prototyping, has emerged as the programming language of option for biological information analysis. Mastering Perl for Bioinformatics addresses the core Perl language and many of its module extensions, presenting them in the context of biological information and troubles of pressing fascination to the biological neighborhood. This book, along with Starting Perl for Bioinformatics, types a standard training course in Perl programming. This second volume finishes the standard Perl tutorial materials (references, sophisticated info structures, object-oriented programming, use of modules--all presented in a biological context) and offers some sophisticated topics of substantial curiosity in bioinformatics. The assortment of subjects coated in Mastering Perl for Bioinformatics prepares the reader for enduring and emerging developments in crucial locations of bioinformatics programming these kinds of as:
  • Gene obtaining
  • String alignment
  • Strategies of information storage and retrieval (SML and databases)
  • Modeling of networks (graphs and Petri nets)
  • Graphics (Tk)
  • Parallelization
  • Interfacing with other programming languages
  • Data (PDL)
  • Protein framework determination
  • Biological types of computation (DNA Computers)
Biologists and computer experts who have conquered the fundamentals of Perl and are prepared to transfer even more in their mastery of this flexible language will appreciate the author\'s effectively-balanced strategy to applying Perl\'s analytical abilities to the area of bioinformatics. Full of practical examples and real-globe biological problem solving, this book is a need to for any reader seeking to move beyond novice stage Perl in bioinformatics.


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